STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASTN2Astrotactin 2. (1279 aa)    
Predicted Functional Partners:
KCNQ5
Potassium voltage-gated channel subfamily Q member 5.
      
 0.624
NDST4
N-deacetylase and N-sulfotransferase 4.
   
  
 0.616
R3HDM2
Uncharacterized protein.
  
   
 0.612
GK5
Glycerol kinase 5; Belongs to the FGGY kinase family.
    
 
 0.599
PM20D1
Peptidase M20 domain containing 1.
      
 0.578
GCC2
GRIP and coiled-coil domain containing 2.
    
 0.573
CRYGC
Gamma-crystallin C; Belongs to the beta/gamma-crystallin family.
      
 0.570
IGSF21
Immunoglobin superfamily member 21.
    
 0.561
ZSCAN23
Zinc finger and SCAN domain containing 23.
    
 0.549
BTBD3
BTB domain containing 3.
      
 0.548
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.