STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCAF2Peptidase M60 domain-containing protein. (917 aa)    
Predicted Functional Partners:
CTHRC1
Collagen triple helix repeat containing 1.
      
 0.599
PPID
Peptidylprolyl isomerase D.
      
 0.523
NEURL4
Uncharacterized protein.
   
  
 0.519
CRYZ
PKS_ER domain-containing protein.
      
 0.515
MCF2L
MCF.2 cell line derived transforming sequence like.
      
 0.515
ENSCAFP00000061033
PKS_ER domain-containing protein.
      
 0.515
DST
Dystonin.
      
 0.514
ATXN10
Ataxin 10.
   
  
 0.491
LOC610648
RNA binding motif protein 14.
   
  
 0.481
NDUFA10
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
      
 0.479
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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