Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BTRC | FBXW11 | ENSCAFP00000014526 | ENSCAFP00000043770 | Beta-transducin repeat containing E3 ubiquitin protein ligase. | F-box and WD repeat domain containing 11. | 0.969 |
BTRC | GLI1 | ENSCAFP00000014526 | ENSCAFP00000061355 | Beta-transducin repeat containing E3 ubiquitin protein ligase. | GLI family zinc finger 1. | 0.945 |
BTRC | GLI3 | ENSCAFP00000014526 | ENSCAFP00000005264 | Beta-transducin repeat containing E3 ubiquitin protein ligase. | GLI family zinc finger 3. | 0.946 |
FBXW11 | BTRC | ENSCAFP00000043770 | ENSCAFP00000014526 | F-box and WD repeat domain containing 11. | Beta-transducin repeat containing E3 ubiquitin protein ligase. | 0.969 |
FBXW11 | GLI1 | ENSCAFP00000043770 | ENSCAFP00000061355 | F-box and WD repeat domain containing 11. | GLI family zinc finger 1. | 0.936 |
FBXW11 | GLI3 | ENSCAFP00000043770 | ENSCAFP00000005264 | F-box and WD repeat domain containing 11. | GLI family zinc finger 3. | 0.937 |
GLI1 | BTRC | ENSCAFP00000061355 | ENSCAFP00000014526 | GLI family zinc finger 1. | Beta-transducin repeat containing E3 ubiquitin protein ligase. | 0.945 |
GLI1 | FBXW11 | ENSCAFP00000061355 | ENSCAFP00000043770 | GLI family zinc finger 1. | F-box and WD repeat domain containing 11. | 0.936 |
GLI1 | GLI3 | ENSCAFP00000061355 | ENSCAFP00000005264 | GLI family zinc finger 1. | GLI family zinc finger 3. | 0.923 |
GLI1 | KIF3A | ENSCAFP00000061355 | ENSCAFP00000001284 | GLI family zinc finger 1. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.941 |
GLI1 | KIF7 | ENSCAFP00000061355 | ENSCAFP00000017637 | GLI family zinc finger 1. | Kinesin family member 7; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.959 |
GLI1 | PRKACA | ENSCAFP00000061355 | ENSCAFP00000053880 | GLI family zinc finger 1. | cAMP-dependent protein kinase catalytic subunit alpha; Phosphorylates a large number of substrates in the cytoplasm and the nucleus. Regulates the abundance of compartmentalized pools of its regulatory subunits through phosphorylation of PJA2 which binds and ubiquitinates these subunits, leading to their subsequent proteolysis. Phosphorylates CDC25B, ABL1, NFKB1, CLDN3, PSMC5/RPT6, PJA2, RYR2, RORA and VASP. RORA is activated by phosphorylation. Required for glucose- mediated adipogenic differentiation increase and osteogenic differentiation inhibition from osteoblasts. Involved in the [...] | 0.944 |
GLI1 | PRKACB | ENSCAFP00000061355 | ENSCAFP00000030135 | GLI family zinc finger 1. | Protein kinase cAMP-activated catalytic subunit beta; Belongs to the protein kinase superfamily. | 0.933 |
GLI1 | SPOP | ENSCAFP00000061355 | ENSCAFP00000024915 | GLI family zinc finger 1. | Speckle type BTB/POZ protein. | 0.971 |
GLI1 | SPOPL | ENSCAFP00000061355 | ENSCAFP00000039009 | GLI family zinc finger 1. | Speckle type BTB/POZ protein like. | 0.959 |
GLI1 | SUFU | ENSCAFP00000061355 | ENSCAFP00000015018 | GLI family zinc finger 1. | Suppressor of fused homolog; Negative regulator in the hedgehog signaling pathway. Down- regulates GLI1-mediated transactivation of target genes. Part of a corepressor complex that acts on DNA-bound GLI1. May also act by linking GLI1 to BTRC and thereby targeting GLI1 to degradation by the proteasome. Sequesters GLI1, GLI2 and GLI3 in the cytoplasm, this effect is overcome by binding of STK36 to both SUFU and a GLI protein. Negative regulator of beta-catenin signaling. Regulates the formation of either the repressor form (GLI3R) or the activator form (GLI3A) of the full-length form of [...] | 0.998 |
GLI3 | BTRC | ENSCAFP00000005264 | ENSCAFP00000014526 | GLI family zinc finger 3. | Beta-transducin repeat containing E3 ubiquitin protein ligase. | 0.946 |
GLI3 | FBXW11 | ENSCAFP00000005264 | ENSCAFP00000043770 | GLI family zinc finger 3. | F-box and WD repeat domain containing 11. | 0.937 |
GLI3 | GLI1 | ENSCAFP00000005264 | ENSCAFP00000061355 | GLI family zinc finger 3. | GLI family zinc finger 1. | 0.923 |
GLI3 | KIF3A | ENSCAFP00000005264 | ENSCAFP00000001284 | GLI family zinc finger 3. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.959 |
page 1 of 3