STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YAE1YAE1 maturation factor of ABCE1. (226 aa)    
Predicted Functional Partners:
LTO1
LTO1 maturation factor of ABCE1.
   
 
 0.970
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
      
 0.904
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.811
ZC3H4
Zinc finger CCCH-type containing 4.
      
 0.685
ELP3
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
  
 0.650
BLZF1
Basic leucine zipper nuclear factor 1.
   
  
 0.625
IBA57
Iron-sulfur cluster assembly factor IBA57.
      
 0.581
NCOA5
Nuclear receptor coactivator 5.
      
 0.563
ABCB7
ATP binding cassette subfamily B member 7.
   
  
 0.554
GLRX5
Glutaredoxin 5.
      
 0.527
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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