STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFPQSplicing factor proline and glutamine rich. (702 aa)    
Predicted Functional Partners:
NONO
Non-POU domain containing octamer binding.
   
  
0.889
DHX9
DExH-box helicase 9.
   
 
 0.778
AGBL5
ATP/GTP binding protein like 5.
      
 0.764
B3GALNT2
Beta-1,3-N-acetylgalactosaminyltransferase 2.
   
  
 0.762
LOC610648
RNA binding motif protein 14.
   
 
 0.751
SLC1A7
Amino acid transporter.
      
 0.751
MATR3
Uncharacterized protein.
   
 
 0.737
PTBP2
Polypyrimidine tract binding protein 2.
   
 
 0.732
FUS
FUS RNA binding protein.
   
 
 0.700
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.699
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.