STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFPQSplicing factor proline and glutamine rich. (702 aa)    
Predicted Functional Partners:
FUS
FUS RNA binding protein.
   
 
 0.745
CPSF6
Cleavage and polyadenylation specific factor 6.
   
 
 0.740
RBM17
RNA binding motif protein 17.
   
  
 0.710
MATR3
Uncharacterized protein.
   
 
 0.707
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.696
SLC1A7
Amino acid transporter.
      
 0.666
B3GALNT2
Beta-1,3-N-acetylgalactosaminyltransferase 2.
      
 0.665
AGBL5
ATP/GTP binding protein like 5.
      
 0.663
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 
 0.661
DHX9
DExH-box helicase 9.
   
 
 0.659
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.