STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP38Ubiquitin specific peptidase 38; Belongs to the peptidase C19 family. (1037 aa)    
Predicted Functional Partners:
USP39
Ubiquitin specific peptidase 39.
   
 
 0.775
MRPL38
Mitochondrial ribosomal protein L38.
   
  
 0.711
WDR48
WD repeat domain 48.
   
 
 0.697
WDR20
WD repeat domain 20.
   
 
 0.589
DMWD
DM1 locus, WD repeat containing.
   
 
 0.585
USPL1
Ubiquitin specific peptidase like 1.
   
 
 0.543
AKTIP
AKT interacting protein.
   
  
 0.542
PPM1B
Protein phosphatase, Mg2+/Mn2+ dependent 1B.
   
 
 0.540
UBB
Ubiquitin B.
   
 
 0.539
LOC100685053
Ubiquitin-like domain-containing protein.
    
 
 0.536
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.