STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRATD1LRAT domain containing 1. (302 aa)    
Predicted Functional Partners:
DOP1B
DOP1 leucine zipper like protein B.
      
 0.780
DOP1A
DOP1 leucine zipper like protein A.
   
  
 0.751
ANKRD55
Ankyrin repeat domain 55.
      
 0.739
RSAD1
Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
      
 0.675
PLAAT1
Phospholipase A and acyltransferase 1.
      
 0.674
RNF113A
Uncharacterized protein.
      
 0.641
PLPP7
Phospholipid phosphatase 7 (inactive).
      
 0.640
RESF1
Retroelement silencing factor 1.
      
 0.627
FEM1A
Fem-1 homolog A.
   
  
 0.626
ZNF358
Zinc finger protein 358.
   
  
 0.619
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.