STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRATD1LRAT domain containing 1. (302 aa)    
Predicted Functional Partners:
DOP1B
DOP1 leucine zipper like protein B.
      
 0.822
DACT2
Dishevelled binding antagonist of beta catenin 2.
   
    0.806
RESF1
Retroelement silencing factor 1.
      
 0.806
DOP1A
DOP1 leucine zipper like protein A.
   
  
 0.804
ANKRD55
Ankyrin repeat domain 55.
      
 0.769
PPP1R1A
Protein phosphatase 1 regulatory inhibitor subunit 1A.
      
 0.749
RSAD1
Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
      
 0.742
PLAAT1
Phospholipase A and acyltransferase 1.
      
 0.713
KIAA0355
KIAA0355.
      
 0.708
FAM49A
Family with sequence similarity 49 member A.
      
 0.681
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.