STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D9TBC1 domain family member 9. (1266 aa)    
Predicted Functional Partners:
PJA2
Praja ring finger ubiquitin ligase 2.
   
  
 0.870
RNF150
Ring finger protein 150.
 
 
  
 0.854
FKBP3
Peptidylprolyl isomerase.
      
 0.733
ELMOD2
ELMO domain containing 2.
   
  
 0.714
HUS1
HUS1 checkpoint clamp component.
   
  
 0.645
MEX3A
Mex-3 RNA binding family member A.
      
 0.614
TBC1D17
TBC1 domain family member 17.
   
  
 0.537
ARID1A
AT-rich interaction domain 1A.
      
 0.532
UFM1
Ubiquitin fold modifier 1.
      
 0.526
TBC1D7
TBC1 domain family member 7.
   
  
 0.525
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.