STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOCTNocturnin. (452 aa)    
Predicted Functional Partners:
SMIM3
Small integral membrane protein 3.
      
 0.833
TLCD4
TLCD4-RWDD3 readthrough.
    
 
 0.732
EDC3
Enhancer of mRNA decapping 3.
    
 
 0.728
SLC38A6
Solute carrier family 38 member 6.
   
  
 0.689
PARN
Poly(A)-specific ribonuclease.
      
 0.674
CNOT1
CCR4-NOT transcription complex subunit 1.
   
 
 0.660
DDX6
DEAD-box helicase 6; Belongs to the DEAD box helicase family.
   
 
 0.648
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
    0.644
CNOT3
CCR4-NOT transcription complex subunit 3.
    
 
 0.619
CNOT2
CCR4-NOT transcription complex subunit 2.
    
 
 0.618
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.