Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CDC42-2 | OCLN | ENSCAFP00000060180 | ENSCAFP00000011546 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (By similarity). Require [...] | Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Interacts with ZO-1. | 0.422 |
| CDC42-2 | PARD3 | ENSCAFP00000060180 | ENSCAFP00000005582 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (By similarity). Require [...] | Par-3 family cell polarity regulator. | 0.940 |
| CDC42-2 | PARD6A | ENSCAFP00000060180 | ENSCAFP00000040187 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (By similarity). Require [...] | Par-6 family cell polarity regulator alpha. | 0.973 |
| CDC42-2 | PARD6G | ENSCAFP00000060180 | ENSCAFP00000000006 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (By similarity). Require [...] | Par-6 family cell polarity regulator gamma. | 0.973 |
| CDC42-2 | PATJ | ENSCAFP00000060180 | ENSCAFP00000054732 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (By similarity). Require [...] | PATJ crumbs cell polarity complex component. | 0.537 |
| CDC42-2 | PRKCI | ENSCAFP00000060180 | ENSCAFP00000021856 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (By similarity). Require [...] | Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. | 0.927 |
| CDC42-2 | PRKCZ | ENSCAFP00000060180 | ENSCAFP00000028644 | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (By similarity). Require [...] | Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. | 0.938 |
| F11R | JAM3 | ENSCAFP00000018655 | ENSCAFP00000064914 | F11 receptor. | Junctional adhesion molecule 3. | 0.917 |
| F11R | OCLN | ENSCAFP00000018655 | ENSCAFP00000011546 | F11 receptor. | Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Interacts with ZO-1. | 0.915 |
| F11R | PARD3 | ENSCAFP00000018655 | ENSCAFP00000005582 | F11 receptor. | Par-3 family cell polarity regulator. | 0.925 |
| F11R | PARD6A | ENSCAFP00000018655 | ENSCAFP00000040187 | F11 receptor. | Par-6 family cell polarity regulator alpha. | 0.586 |
| F11R | PARD6G | ENSCAFP00000018655 | ENSCAFP00000000006 | F11 receptor. | Par-6 family cell polarity regulator gamma. | 0.542 |
| F11R | PRKCI | ENSCAFP00000018655 | ENSCAFP00000021856 | F11 receptor. | Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. | 0.592 |
| F11R | PRKCZ | ENSCAFP00000018655 | ENSCAFP00000028644 | F11 receptor. | Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. | 0.595 |
| JAM3 | F11R | ENSCAFP00000064914 | ENSCAFP00000018655 | Junctional adhesion molecule 3. | F11 receptor. | 0.917 |
| JAM3 | OCLN | ENSCAFP00000064914 | ENSCAFP00000011546 | Junctional adhesion molecule 3. | Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Interacts with ZO-1. | 0.612 |
| JAM3 | PARD3 | ENSCAFP00000064914 | ENSCAFP00000005582 | Junctional adhesion molecule 3. | Par-3 family cell polarity regulator. | 0.932 |
| NECTIN1 | PARD3 | ENSCAFP00000017680 | ENSCAFP00000005582 | Uncharacterized protein. | Par-3 family cell polarity regulator. | 0.932 |
| OCLN | CDC42-2 | ENSCAFP00000011546 | ENSCAFP00000060180 | Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Interacts with ZO-1. | Cell division control protein 42 homolog; Plasma membrane-associated small GTPase which cycles between an active GTP-bound and an inactive GDP-bound state. In active state binds to a variety of effector proteins to regulate cellular responses. Involved in epithelial cell polarization processes. Regulates the bipolar attachment of spindle microtubules to kinetochores before chromosome congression in metaphase. Regulates cell migration. In neurons, plays a role in the extension and maintenance of the formation of filopodia, thin and actin-rich surface projections (By similarity). Require [...] | 0.422 |
| OCLN | F11R | ENSCAFP00000011546 | ENSCAFP00000018655 | Occludin; May play a role in the formation and regulation of the tight junction (TJ) paracellular permeability barrier. Interacts with ZO-1. | F11 receptor. | 0.915 |
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