STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSGN1Mesogenin 1. (188 aa)    
Predicted Functional Partners:
SMC6
Structural maintenance of chromosomes 6.
      
 0.703
VSNL1
Visinin like 1.
      
 0.677
TBX6
T-box transcription factor 6.
   
 
 0.625
GEN1
GEN1 Holliday junction 5' flap endonuclease.
      
 0.608
CCDC14
Coiled-coil domain containing 14.
      
 0.573
ANXA10
Annexin A10.
      
 0.564
MESP2
Mesoderm posterior bHLH transcription factor 2.
   
  
 0.523
DPCD
Deleted in primary ciliary dyskinesia homolog.
      
 0.515
SPAG9
Sperm associated antigen 9.
   
  
 0.512
GNAL
G protein subunit alpha L.
   
  
 0.509
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.