STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C19H4orf33Chromosome 19 C4orf33 homolog. (273 aa)    
Predicted Functional Partners:
TAF11
TATA-box binding protein associated factor 11.
      
 0.733
MRPS18C
Mitochondrial ribosomal protein S18C.
      
 0.692
F1Q0A9_CANLF
Uncharacterized protein.
      
 0.683
ZFYVE19
Zinc finger FYVE-type containing 19.
      
 0.599
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
      
 0.589
MPZL1
Myelin protein zero like 1.
      
 0.581
VAC14
VAC14 component of PIKFYVE complex.
    
   0.565
RBM39
RNA binding motif protein 39.
      
 0.539
USP33
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.530
AP2B1
AP complex subunit beta.
      
 0.529
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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