STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP1BLa ribonucleoprotein domain family member 1B. (945 aa)    
Predicted Functional Partners:
LARP1
La ribonucleoprotein domain family member 1.
   
   0.929
UBAP2
Ubiquitin associated protein 2.
   
 
 0.730
JAZF1
JAZF zinc finger 1.
   
 
 0.711
PGRMC2
Progesterone receptor membrane component 2; Belongs to the cytochrome b5 family.
   
 
 0.709
SYNDIG1L
Synapse differentiation inducing 1 like.
      
 0.701
LIN52
Lin-52 DREAM MuvB core complex component.
      
 0.699
ZCCHC13
Zinc finger CCHC-type containing 13.
   
 
 0.693
DHX15
DEAH-box helicase 15.
   
 
 0.685
DKC1
Dyskerin pseudouridine synthase 1.
   
 
 0.670
GTF2A1
General transcription factor IIA subunit 1.
      
 0.637
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.