STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LARP1BLa ribonucleoprotein domain family member 1B. (945 aa)    
Predicted Functional Partners:
SYNDIG1L
Synapse differentiation inducing 1 like.
      
 0.764
MAN1A2
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.728
UBAP2
Ubiquitin associated protein 2.
   
 
 0.692
GTF2A1
General transcription factor IIA subunit 1.
      
 0.690
JAZF1
JAZF zinc finger 1.
    
 
 0.689
PGRMC2
Progesterone receptor membrane component 2; Belongs to the cytochrome b5 family.
   
 
 0.674
LIN52
Lin-52 DREAM MuvB core complex component.
      
 0.673
RERE
Arginine-glutamic acid dipeptide repeats.
      
 0.644
RRP12
Ribosomal RNA processing 12 homolog.
   
  
 0.613
WDR92
WD repeat domain 92.
    
 
 0.605
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.