STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC482987Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 member 1.
   
 0.920
SLC7A9
Solute carrier family 7 member 9.
     
  0.806
SLC3A2
Aamy domain-containing protein.
   
 0.699
SLC13A1
Solute carrier family 13 member 1.
  
 
 0.613
PLA2G1B
Phospholipase A2; PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides, this releases glycerophospholipids and arachidonic acid that serve as the precursors of signal molecules; Belongs to the phospholipase A2 family.
   
  
 0.573
LOC478196
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.569
CEL
Carboxyl ester lipase; Belongs to the type-B carboxylesterase/lipase family.
   
  
 0.557
LOC478220
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 
 0.547
DGCR2
DiGeorge syndrome critical region gene 2.
   
 
  0.543
PRSS57
Serine protease 57; Belongs to the peptidase S1 family.
   
 
  0.538
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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