STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC40Cell division cycle 40. (655 aa)    
Predicted Functional Partners:
DHX38
DEAH-box helicase 38.
   
 0.995
CWC25
CWC25 spliceosome associated protein homolog.
    
 0.994
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.994
YJU2
YJU2 splicing factor homolog.
    
 0.994
SLU7
SLU7 homolog, splicing factor.
   
 0.993
DHX16
DEAH-box helicase 16.
   
 0.990
CCDC12
Coiled-coil domain containing 12.
    
  0.990
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.988
CDC5L
Cell division cycle 5 like.
   
 
 0.986
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 
 0.978
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.