STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUCB1Nucleobindin 1. (457 aa)    
Predicted Functional Partners:
NUCB2
Nucleobindin 2.
   
   0.935
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
 0.795
CDK3
Cyclin dependent kinase 3; Belongs to the protein kinase superfamily.
    
   0.768
PPP2R5D
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
   
  
 0.749
FSTL1
Follistatin like 1.
   
  
 0.631
GOLGB1
Golgin B1.
      
 0.624
PLCD1
Phosphoinositide phospholipase C.
    
 
 0.597
GCC2
GRIP and coiled-coil domain containing 2.
      
 0.594
RCN1
Reticulocalbin 1.
   
 
 0.573
CALU
Family with sequence similarity 71 member F1.
   
 
 0.573
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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