STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSBP1Single stranded DNA binding protein 1. (148 aa)    
Predicted Functional Partners:
MRPS2
Mitochondrial ribosomal protein S2.
   
 0.840
CLPP
ATP-dependent Clp protease proteolytic subunit.
   
 0.792
HSPD1
60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.
   
 0.779
POLG
DNA polymerase gamma, catalytic subunit.
   
 0.776
HSD17B10
Hydroxysteroid 17-beta dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.770
MRPS6
Mitochondrial ribosomal protein S6.
  
  
 0.743
MRPL35
Mitochondrial ribosomal protein L35.
   
 
 0.733
INTS3
Integrator complex subunit 3.
    
 
 0.725
ENSCAFP00000058170
Ribosomal_S10 domain-containing protein.
   
 0.717
TWNK
Twinkle mtDNA helicase.
   
 
 0.703
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.