STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD2BATPase family AAA domain containing 2B. (1458 aa)    
Predicted Functional Partners:
GPD2
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.758
CEP350
Centrosomal protein 350.
   
 
 0.747
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
   
   0.735
UBR1
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.702
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.700
BDP1
B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB.
   
    0.673
PHIP
Pleckstrin homology domain interacting protein.
   
 
0.673
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 
 0.666
PSMD12
Proteasome 26S subunit, non-ATPase 12.
   
 
 0.632
PSMD11
Proteasome 26S subunit, non-ATPase 11.
   
 
 0.627
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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