STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA6Spermatogenesis associated 6. (488 aa)    
Predicted Functional Partners:
RSPH1
Radial spoke head 1 homolog.
   
  
 0.873
TTC26
Tetratricopeptide repeat domain 26.
   
  
 0.804
TSSK4
Testis specific serine kinase 4.
   
  
 0.803
NEURL1
Neuralized E3 ubiquitin protein ligase 1.
      
 0.795
TSGA10
Testis specific 10.
   
  
 0.791
MARCHF10
Membrane associated ring-CH-type finger 10.
      
 0.719
CFAP44
Cilia and flagella associated protein 44.
   
  
 0.707
SPATA18
Spermatogenesis associated 18.
   
  
 0.706
PMFBP1
Polyamine modulated factor 1 binding protein 1.
    
 
 0.695
SUN5
Sad1 and UNC84 domain containing 5.
      
 0.683
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.