STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA6Spermatogenesis associated 6. (488 aa)    
Predicted Functional Partners:
QRICH1
Glutamine rich 1.
      
 0.809
TSSK4
Testis specific serine kinase 4.
   
  
 0.786
SPATA18
Spermatogenesis associated 18.
   
  
 0.780
MARCHF10
Membrane associated ring-CH-type finger 10.
      
 0.774
PRND
Prion like protein doppel.
      
 0.748
CFAP44
Cilia and flagella associated protein 44.
   
  
 0.719
CABYR
Calcium binding tyrosine phosphorylation regulated.
   
  
 0.687
ROPN1
Uncharacterized protein.
      
 0.677
CNTLN
Centlein.
   
  
 0.676
SUN5
Sad1 and UNC84 domain containing 5.
      
 0.661
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.