STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS7Pseudouridine synthase 7. (695 aa)    
Predicted Functional Partners:
RPUSD4
RNA pseudouridine synthase D4.
   
 
 0.926
RPUSD3
RNA pseudouridine synthase D3.
    
 
 0.925
PUS3
Pseudouridine synthase 3.
   
 
 0.903
PUS1
Pseudouridine synthase 1.
   
 
 0.893
RPUSD1
RNA pseudouridine synthase domain containing 1.
    
 
 0.858
NOC3L
Nucleolar complex protein 3 homolog.
   
   0.842
TRUB2
TruB pseudouridine synthase family member 2.
   
  
 0.807
RBM28
RNA binding motif protein 28.
   
    0.794
UTP4
UTP4 small subunit processome component.
   
    0.787
PUS10
Pseudouridine synthase 10.
   
  
 0.783
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.