STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C12H6orf120Chromosome 12 C6orf120 homolog. (160 aa)    
Predicted Functional Partners:
ERLIN1
ER lipid raft associated 1.
    
 
 0.809
ERLIN2
ER lipid raft associated 2.
    
 
 0.693
TMUB1
Transmembrane and ubiquitin like domain containing 1.
      
 0.692
TMEM259
Transmembrane protein 259.
      
 0.692
WDR27
WD repeat domain 27.
      
 0.692
RNF170
Ring finger protein 170.
      
 0.689
PHF10
PHD finger protein 10.
      
 0.594
TMUB2
Transmembrane and ubiquitin like domain containing 2.
      
 0.580
TMCO1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling; Belongs to the TMCO1 family.
      
 0.576
RNF5
Ring finger protein 5.
      
 0.534
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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