STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFR3BEFR3 homolog B. (916 aa)    
Predicted Functional Partners:
TTC7B
Tetratricopeptide repeat domain 7B.
   
 
 0.939
RHEX
Regulator of hemoglobinization and erythroid cell expansion.
   
  
 0.847
NUGGC
Nuclear GTPase, germinal center associated.
      
 0.827
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
   
 
 0.819
TTC7A
Tetratricopeptide repeat domain 7A.
   
 
 0.795
FAM83D
Family with sequence similarity 83 member D.
      
 0.686
RTP4
Receptor transporter protein 4.
      
 0.630
HOXC4
Homeobox C4.
   
 
 0.622
SLC30A8
Solute carrier family 30 member 8.
   
  
 0.598
SOX13
SRY-box 13.
      
 0.598
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.