STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H4Zinc finger CCCH-type containing 4. (1276 aa)    
Predicted Functional Partners:
TSC22D2
TSC22 domain family member 2.
      
 0.808
HOXB6
Homeobox B6.
      
 0.788
SYMPK
Symplekin.
   
 
 0.726
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 
 0.718
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 
 0.712
CSTF3
Cleavage stimulation factor subunit 3.
   
 
 0.707
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 
 0.705
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 
 0.705
GSC
Goosecoid homeobox.
    
   0.705
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 
 0.699
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.