STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM160Transmembrane protein 160. (222 aa)    
Predicted Functional Partners:
SAC3D1
SAC3 domain containing 1.
      
 0.764
SQSTM1
Sequestosome 1.
    
   0.682
GTF3A
General transcription factor IIIA.
   
  
 0.619
TMEM9
Uncharacterized protein.
      
 0.612
FAIM2
Fas apoptotic inhibitory molecule 2; Belongs to the BI1 family.
      
 0.599
PACC1
Transmembrane protein 206.
   
  
 0.597
DGKG
Diacylglycerol kinase.
      
 0.592
GRB14
Growth factor receptor bound protein 14.
   
  
 0.591
SEC16B
Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.
      
 0.591
GRB14-2
Uncharacterized protein.
      
 0.591
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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