STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARMC10Armadillo repeat containing 10. (473 aa)    
Predicted Functional Partners:
SNN
Stannin.
      
 0.727
GSAP
Gamma-secretase activating protein.
    
 0.716
ZNF184
Zinc finger protein 184.
    
 0.706
APEX2
DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.
    
 
 0.689
ZXDC
ZXD family zinc finger C.
    
 0.683
TMX1
Thioredoxin related transmembrane protein 1.
    
 
 0.614
MARCHF5
Membrane associated ring-CH-type finger 5.
   
 
 0.602
ATAD3A
ATPase family AAA domain containing 3A.
    
 
 0.596
AKAP1
A-kinase anchoring protein 1.
    
 
 0.595
TRIM16
Uncharacterized protein.
    
 0.579
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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