STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN1Tetraspanin. (295 aa)    
Predicted Functional Partners:
METTL7B
Methyltransferase like 7B.
    
 
 0.628
LGALS2
Galectin.
   
 
 0.618
MLF1
Myeloid leukemia factor 1.
      
 0.610
MEP1A
Meprin A subunit.
   
  
 0.598
TM4SF4
Transmembrane 4 L six family member 4.
      
 0.592
TM4SF1
Transmembrane 4 L six family member 1.
      
 0.539
PSIP1
PC4 and SFRS1 interacting protein 1.
      
 0.535
SEC14L2
Uncharacterized protein.
   
  
 0.535
TSPAN14
Tetraspanin.
      
 0.524
TM4SF5
Transmembrane 4 L six family member 5.
      
 0.496
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.