STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHTF2Putative homeodomain transcription factor 2. (751 aa)    
Predicted Functional Partners:
SHPRH
SNF2 histone linker PHD RING helicase.
    
 
 0.804
ARID3B
AT-rich interaction domain 3B.
   
 
 0.785
FIGN
Fidgetin, microtubule severing factor; Belongs to the AAA ATPase family.
   
 
 0.696
YOD1
YOD1 deubiquitinase.
      
 0.689
CLMP
CXADR like membrane protein.
      
 0.665
ZFYVE26
Zinc finger FYVE-type containing 26.
      
 0.663
SMARCAD1
Uncharacterized protein.
   
 
 0.660
SRSF7
Serine and arginine rich splicing factor 7.
    
 
 0.648
UBQLN1
Ubiquilin 1.
   
 
 0.621
CSMD1
CUB and Sushi multiple domains 1.
    
 
 0.606
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.