STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACBD5Acyl-CoA-binding domain-containing protein 5; Binds medium- and long-chain acyl-CoA esters. (529 aa)    
Predicted Functional Partners:
VAPB
VAMP associated protein B and C.
   
 
 0.807
EFCC1
EF-hand and coiled-coil domain containing 1.
   
    0.805
VAPA
VAMP associated protein A.
   
 
 0.803
PEX16
Peroxisomal membrane protein PEX16.
   
 0.723
DNAJC16
DnaJ heat shock protein family (Hsp40) member C16.
   
  
 0.716
PEX19
Peroxisomal biogenesis factor 19.
   
 
 0.695
PXMP4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
   
 
 0.693
ASRGL1
Asparaginase like 1.
   
  
 0.687
CREBRF
CREB3 regulatory factor.
   
  
 0.680
PDZD8
PDZ domain containing 8.
   
  
 0.679
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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