STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL5BADP ribosylation factor like GTPase 5B; Belongs to the small GTPase superfamily. Arf family. (179 aa)    
Predicted Functional Partners:
NSUN6
NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.867
VPS54
VPS54 subunit of GARP complex.
    
 
 0.696
RMND5B
Required for meiotic nuclear division 5 homolog B.
   
  
 0.672
SYS1
Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.
   
  
 0.646
USP21
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 
 0.644
CACNB2
Calcium voltage-gated channel auxiliary subunit beta 2.
 
 
 
 0.639
KLHL15
Kelch like family member 15.
   
 
 0.617
NABP2
Nucleic acid binding protein 2.
   
  
 0.607
MOCS1
Molybdenum cofactor synthesis 1.
      
 0.604
ITSN2
Intersectin 2.
    
 
 0.603
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.