STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL5BADP ribosylation factor like GTPase 5B; Belongs to the small GTPase superfamily. Arf family. (179 aa)    
Predicted Functional Partners:
NSUN6
NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.823
CACNB2
Calcium voltage-gated channel auxiliary subunit beta 2.
   
 0.682
ARL5A
ADP ribosylation factor like GTPase 5A; Belongs to the small GTPase superfamily. Arf family.
   
   0.673
VPS53
VPS53 subunit of GARP complex.
    
 
 0.609
NCAM2
Neural cell adhesion molecule 2.
    
 0.598
USP21
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 
 0.547
CHN2
Chimaerin; GTPase-activating protein for p21-rac.
   
 0.547
RMND5B
Required for meiotic nuclear division 5 homolog B.
   
  
 0.547
NABP2
Nucleic acid binding protein 2.
   
  
 0.545
VPS54
VPS54 subunit of GARP complex.
    
 
 0.537
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.