STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XPCXPC complex subunit, DNA damage recognition and repair factor. (949 aa)    
Predicted Functional Partners:
CETN2
Uncharacterized protein.
    
 0.997
J9P4Y0_CANLF
Uncharacterized protein.
    
 
 0.986
GTF2H1
General transcription factor IIH subunit 1.
   
 0.961
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 0.959
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
   
 0.952
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
   
 0.944
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
   
 0.942
DDB2
Damage specific DNA binding protein 2.
   
 0.880
XPA
XPA, DNA damage recognition and repair factor.
    
 0.873
ERCC5
Uncharacterized protein.
   
 
 0.848
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.