STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUBCNLRubicon like autophagy enhancer. (502 aa)    
Predicted Functional Partners:
UVRAG
UV radiation resistance associated.
    
 0.879
LIX1
Limb and CNS expressed 1.
   
    0.757
LOC607552
Uncharacterized protein.
   
    0.757
SLCO1A2
Solute carrier organic anion transporter family member.
   
    0.757
PGM2
Phosphoglucomutase 2.
   
    0.757
CWC25
CWC25 spliceosome associated protein homolog.
   
    0.757
ACOT11
Acyl-CoA thioesterase 11.
   
    0.757
C15H1orf109
Chromosome 15 C1orf109 homolog.
   
    0.757
FTSJ1
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
    0.750
SP100
SP100 nuclear antigen.
   
   0.742
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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