STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SDK2Sidekick cell adhesion molecule 2. (2120 aa)    
Predicted Functional Partners:
SLC35F1
Solute carrier family 35 member F1.
      
 0.761
HINFP
Histone H4 transcription factor.
      
 0.741
ZNF516
Zinc finger protein 516.
      
 0.708
BICC1
BicC family RNA binding protein 1.
      
 0.701
KIRREL3
Kirre like nephrin family adhesion molecule 3.
   
  
 0.627
APOLD1
Apolipoprotein L domain containing 1.
    
 
 0.573
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.562
SEMA5B
Semaphorin 5B.
   
 
 0.530
SEMA5A
Semaphorin 5A.
   
 
 0.530
PCDH18
Protocadherin 18.
    
 0.518
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.