STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C9H17orf80Chromosome 9 C17orf80 homolog. (565 aa)    
Predicted Functional Partners:
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
   
 
 0.795
HADHB
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.785
ENSCAFP00000044304
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.785
ATP5F1D
ATP synthase F1 subunit delta.
   
 
 0.774
TM2D3
TM2 domain containing 3.
   
   0.772
ATP5F1E
ATP synthase F1 subunit epsilon.
   
 
 0.751
HADHA
Hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family.
   
   0.740
F1PAS4_CANLF
Uncharacterized protein.
   
 
 0.702
ATP5ME
Uncharacterized protein.
   
 
 0.702
ATP5F1B
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 
 0.682
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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