STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C20H3orf20Chromosome 20 C3orf20 homolog. (902 aa)    
Predicted Functional Partners:
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.635
MRPL32
Mitochondrial ribosomal protein L32.
   
 
 0.613
MRPL40
Mitochondrial ribosomal protein L40.
   
   0.612
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
 
 0.608
MRPL52
Mitochondrial ribosomal protein L52.
   
 
 0.602
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.585
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.581
MRPL55
Mitochondrial ribosomal protein L55.
   
 
 0.571
MRPL51
Mitochondrial ribosomal protein L51.
   
 
 0.568
DAP3
Death associated protein 3.
   
 
 0.560
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.