STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C20H3orf20Chromosome 20 C3orf20 homolog. (902 aa)    
Predicted Functional Partners:
MRPL52
Mitochondrial ribosomal protein L52.
   
 
 0.496
MRPL32
Mitochondrial ribosomal protein L32.
   
 
 0.466
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.466
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.441
MRPL40
Mitochondrial ribosomal protein L40.
   
   0.439
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.430
LOC486445
Uncharacterized protein.
  
     0.418
MRPL18
Mitochondrial ribosomal protein L18.
   
   0.411
MRPL23
Uncharacterized protein.
   
   0.410
CHCHD1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
 
 0.405
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.