STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SIAH3E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. (266 aa)    
Predicted Functional Partners:
CACYBP
Calcyclin binding protein.
    
 0.711
TOMM7
Translocase of outer mitochondrial membrane 7.
     
 0.643
PINK1
PTEN induced kinase 1.
    
 0.600
LRCH1
Leucine rich repeats and calponin homology domain containing 1.
    
 
 0.591
MORN1
MORN repeat containing 1.
   
  
 0.583
TTC34
Tetratricopeptide repeat domain 34.
   
  
 0.518
LRRC63
Leucine rich repeat containing 63.
    
 
 0.506
SLC52A1
Uncharacterized protein.
      
 0.469
GMDS
GDP-mannose 4,6-dehydratase.
      
 0.468
TBL1XR1
Transducin beta like 1 X-linked receptor 1.
    
  0.461
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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