STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD42Ankyrin repeat domain 42. (533 aa)    
Predicted Functional Partners:
PCF11
PCF11 cleavage and polyadenylation factor subunit.
 
  
 
 0.787
CCDC90B
Coiled-coil domain containing 90B.
      
 0.717
CBFA2T2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
    
 
 0.672
HSDL2
Hydroxysteroid dehydrogenase like 2.
    
 
 0.665
PPP1R8
Protein phosphatase 1 regulatory subunit 8.
   
  
 0.660
DNAI1
Dynein axonemal intermediate chain 1.
    
 
 0.657
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
   
 
 0.644
NUP153
Nucleoporin 153.
    
 
 0.625
SNTA1
Syntrophin alpha 1.
    
 
 0.606
C1QL4
Complement C1q like 4.
    
 
 0.601
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.