STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H1-8H15 domain-containing protein. (293 aa)    
Predicted Functional Partners:
H1-6
H15 domain-containing protein.
   
 
 0.911
H1FOO
Uncharacterized protein.
 
      0.869
MTIF3
Mitochondrial translational initiation factor 3.
      
 0.829
YBEY
YbeY metalloendoribonuclease.
      
 0.827
H1-0
H1 histone family member 0.
   
 
 0.774
H1-5
Histone cluster 1 H1 family member b.
   
 
 0.735
RBFA
Uncharacterized protein.
      
 0.630
H1-7
Uncharacterized protein.
      
 0.532
TSFM
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
      
 0.518
FIGLA
Folliculogenesis specific bHLH transcription factor.
   
  
 0.491
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.