CGREF1 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CGREF1

Uncharacterized protein. (392 aa)

Predicted Functional Partners:

CGRRF1

0.734

PREB

0.521

TMEM130

0.471

SLC13A5

0.461

SPOCK1

0.413

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CGREF1	CGRRF1	ENSCAFP00000006960	ENSCAFP00000039351	Uncharacterized protein.	Cell growth regulator with ring finger domain 1.	0.734
CGREF1	PREB	ENSCAFP00000006960	ENSCAFP00000006982	Uncharacterized protein.	Prolactin regulatory element binding.	0.521
CGREF1	SLC13A5	ENSCAFP00000006960	ENSCAFP00000022673	Uncharacterized protein.	Solute carrier family 13 member 5.	0.461
CGREF1	SPOCK1	ENSCAFP00000006960	ENSCAFP00000055505	Uncharacterized protein.	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1.	0.413
CGREF1	TMEM130	ENSCAFP00000006960	ENSCAFP00000053633	Uncharacterized protein.	Transmembrane protein 130.	0.471
CGRRF1	CGREF1	ENSCAFP00000039351	ENSCAFP00000006960	Cell growth regulator with ring finger domain 1.	Uncharacterized protein.	0.734
PREB	CGREF1	ENSCAFP00000006982	ENSCAFP00000006960	Prolactin regulatory element binding.	Uncharacterized protein.	0.521
SLC13A5	CGREF1	ENSCAFP00000022673	ENSCAFP00000006960	Solute carrier family 13 member 5.	Uncharacterized protein.	0.461
SPOCK1	CGREF1	ENSCAFP00000055505	ENSCAFP00000006960	SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1.	Uncharacterized protein.	0.413
TMEM130	CGREF1	ENSCAFP00000053633	ENSCAFP00000006960	Transmembrane protein 130.	Uncharacterized protein.	0.471