STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM80Uncharacterized protein. (615 aa)    
Predicted Functional Partners:
DDX58
DExD/H-box helicase 58.
   
 
 0.652
F6Y518_CANLF
IRF-3 domain-containing protein.
   
 
 0.550
UBE2L6
Ubiquitin conjugating enzyme E2 L6; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.503
RNF125
Ring finger protein 125.
    
 
 0.488
TRIM23
Tripartite motif containing 23.
    
 
 0.486
MEX3C
Mex-3 RNA binding family member C.
   
 
 0.482
LOC480351
Uncharacterized protein.
  
 
   0.482
ZUP1
Zinc finger containing ubiquitin peptidase 1.
   
 
 0.475
TRIM41
Tripartite motif containing 41.
      
0.449
EIF2AK2
Eukaryotic translation initiation factor 2-alpha kinase 2.
   
 
 0.446
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.