STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM80Uncharacterized protein. (615 aa)    
Predicted Functional Partners:
DDX58
DExD/H-box helicase 58.
   
 0.936
TRIM25
Tripartite motif containing 25.
     
  0.677
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.587
ZC3HAV1
Zinc finger CCCH-type containing, antiviral 1.
   
 
 0.580
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.568
UBE2D1
Ubiquitin conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.539
DHX58
DExH-box helicase 58.
    
 0.505
LOC480351
Uncharacterized protein.
  
 
   0.471
CD2AP
CD2 associated protein.
   
    0.463
SQSTM1
Sequestosome 1.
    
 
 0.460
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.