STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMUB1Transmembrane and ubiquitin like domain containing 1. (294 aa)    
Predicted Functional Partners:
ERLIN2
ER lipid raft associated 2.
    
 
 0.938
RNF170
Ring finger protein 170.
    
 
 0.908
RNF5
Ring finger protein 5.
    
 
 0.893
ERLIN1
ER lipid raft associated 1.
    
 
 0.888
TMUB2
Transmembrane and ubiquitin like domain containing 2.
    
   0.813
TMEM259
Transmembrane protein 259.
    
 
 0.802
TMEM126A
Transmembrane protein 126A.
      
 0.780
C12H6orf120
Chromosome 12 C6orf120 homolog.
      
 0.692
FAM3C
Family with sequence similarity 3 member C.
      
 0.689
AMFR
Autocrine motility factor receptor.
    
 
 0.664
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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