STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WBP4WW domain binding protein 4. (371 aa)    
Predicted Functional Partners:
PRPF31
Nop domain-containing protein.
    
 
 0.878
ZMAT2
Zinc finger matrin-type 2.
   
 
 0.846
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 
 0.843
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 
 0.809
PPIH
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.789
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.773
MFAP1
Microfibril associated protein 1.
   
 
 0.706
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
    
 
 0.694
PRPF3
Pre-mRNA processing factor 3.
    
 
 0.690
SF3B1
Splicing factor 3b subunit 1.
    
 
 0.664
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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