STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATRAIDAll-trans retinoic acid induced differentiation factor. (229 aa)    
Predicted Functional Partners:
SLC37A3
Solute carrier family 37 member 3.
    
 
 0.898
LMBRD1
LMBR1 domain containing 1.
      
 0.712
DMC1
Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily.
      
 0.693
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
   
  
 0.664
SNX17
Sorting nexin 17.
   
  
 0.633
REC8
REC8 meiotic recombination protein.
      
 0.610
CRABP2
Cellular retinoic acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
      
 0.610
SOHLH1
Spermatogenesis and oogenesis specific basic helix-loop-helix 1.
      
 0.594
STRA8
Stimulated by retinoic acid 8.
      
 0.591
NANOS2
Nanos C2HC-type zinc finger 2; Belongs to the nanos family.
      
 0.591
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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