STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTDSPLCTD small phosphatase like. (283 aa)    
Predicted Functional Partners:
CDCA3
Cell division cycle associated 3.
    
 
 0.627
GTF2F1
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 
 0.622
CTDSP1
CTD small phosphatase 1.
  
  
0.589
MBP
Myelin basic protein.
    
 
 0.589
TTC39A
Tetratricopeptide repeat domain 39A.
      
 0.515
WWC2
WW and C2 domain containing 2.
   
  
 0.512
LMO7
LIM domain 7.
   
 
 0.508
CPED1
Cadherin like and PC-esterase domain containing 1.
      
 0.503
UNC13B
Uncharacterized protein.
   
  
 0.503
PDZD2
PDZ domain containing 2.
   
  
 0.485
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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