STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
E2RFE6_CANLF4F5 domain-containing protein. (145 aa)    
Predicted Functional Partners:
ATP5F1E
ATP synthase F1 subunit epsilon.
   
    0.455
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
    0.451
ENSCAFP00000054759
Ubiquitin-like domain-containing protein.
   
    0.451
ENSCAFP00000061156
Ubiquitin-like domain-containing protein.
   
    0.451
RPL24
Ribosomal protein L24.
   
    0.450
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
  
 0.411
ENSCAFP00000049008
Uncharacterized protein.
   
  
 0.408
RPL28
Ribosomal protein L28.
   
  
 0.408
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.