STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF513Zinc finger protein 513. (543 aa)    
Predicted Functional Partners:
LYPD6
LY6/PLAUR domain containing 6.
      
 0.872
TTC7A
Tetratricopeptide repeat domain 7A.
      
 0.855
LITAF
LITAF domain-containing protein.
    
 0.789
TBC1D30
TBC1 domain family member 30.
   
  
 0.675
RAB40B
RAB40B, member RAS oncogene family.
   
 
 0.665
IFT172
Intraflagellar transport 172.
   
  
 0.646
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
   
  
 0.623
PRPF31
Nop domain-containing protein.
   
 
 0.579
PRPF6
Pre-mRNA processing factor 6.
   
 
 0.568
C6H1orf194
Chromosome 6 C1orf194 homolog.
      
 0.563
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.