STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH20Protocadherin 20. (951 aa)    
Predicted Functional Partners:
SCAPER
S-phase cyclin A associated protein in the ER.
   
  
 0.779
RAB9B
RAB9B, member RAS oncogene family.
   
  
 0.720
RAB33A
RAB33A, member RAS oncogene family.
   
  
 0.688
TTC6
Tetratricopeptide repeat domain 6.
   
  
 0.669
EGFL8
EGF like domain multiple 8.
      
 0.669
SLC25A46
Solute carrier family 25 member 46; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.640
BRICD5
BRICHOS domain containing 5.
      
 0.636
SNX25
Sorting nexin 25.
      
 0.612
TMEM232
Transmembrane protein 232.
      
 0.592
ADAD1
Adenosine deaminase domain containing 1.
   
  
 0.574
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.