GALNTL5 protein (Canis lupus familiaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

GALNTL5

Polypeptide N-acetylgalactosaminyltransferase like 5. (461 aa)

Predicted Functional Partners:

B3GNT6

0.900

CCDC126

0.796

DPY19L3

0.795

ASB17

0.746

OR5AR1

0.745

WDR63

0.739

RAP1GDS1

0.730

TRDV3

0.720

LVRN

0.715

RGS12

0.713

Your Current Organism:

Canis lupus familiaris

NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASB17	CCDC126	ENSCAFP00000030238	ENSCAFP00000062038	Ankyrin repeat and SOCS box protein 17; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.	Coiled-coil domain containing 126.	0.788
ASB17	DPY19L3	ENSCAFP00000030238	ENSCAFP00000032538	Ankyrin repeat and SOCS box protein 17; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.	Dpy-19 like C-mannosyltransferase 3.	0.788
ASB17	GALNTL5	ENSCAFP00000030238	ENSCAFP00000007359	Ankyrin repeat and SOCS box protein 17; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.	Polypeptide N-acetylgalactosaminyltransferase like 5.	0.746
ASB17	OR5AR1	ENSCAFP00000030238	ENSCAFP00000011844	Ankyrin repeat and SOCS box protein 17; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.	Olfactory receptor.	0.890
ASB17	RAP1GDS1	ENSCAFP00000030238	ENSCAFP00000015079	Ankyrin repeat and SOCS box protein 17; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.	Rap1 GTPase-GDP dissociation stimulator 1.	0.785
ASB17	TRDV3	ENSCAFP00000030238	ENSCAFP00000036148	Ankyrin repeat and SOCS box protein 17; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.	T cell receptor delta variable 3.	0.711
B3GNT6	GALNTL5	ENSCAFP00000007753	ENSCAFP00000007359	Hexosyltransferase.	Polypeptide N-acetylgalactosaminyltransferase like 5.	0.900
CCDC126	ASB17	ENSCAFP00000062038	ENSCAFP00000030238	Coiled-coil domain containing 126.	Ankyrin repeat and SOCS box protein 17; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.	0.788
CCDC126	DPY19L3	ENSCAFP00000062038	ENSCAFP00000032538	Coiled-coil domain containing 126.	Dpy-19 like C-mannosyltransferase 3.	0.814
CCDC126	GALNTL5	ENSCAFP00000062038	ENSCAFP00000007359	Coiled-coil domain containing 126.	Polypeptide N-acetylgalactosaminyltransferase like 5.	0.796
CCDC126	OR5AR1	ENSCAFP00000062038	ENSCAFP00000011844	Coiled-coil domain containing 126.	Olfactory receptor.	0.797
CCDC126	RAP1GDS1	ENSCAFP00000062038	ENSCAFP00000015079	Coiled-coil domain containing 126.	Rap1 GTPase-GDP dissociation stimulator 1.	0.790
CCDC126	TRDV3	ENSCAFP00000062038	ENSCAFP00000036148	Coiled-coil domain containing 126.	T cell receptor delta variable 3.	0.743
DPY19L3	ASB17	ENSCAFP00000032538	ENSCAFP00000030238	Dpy-19 like C-mannosyltransferase 3.	Ankyrin repeat and SOCS box protein 17; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.	0.788
DPY19L3	CCDC126	ENSCAFP00000032538	ENSCAFP00000062038	Dpy-19 like C-mannosyltransferase 3.	Coiled-coil domain containing 126.	0.814
DPY19L3	GALNTL5	ENSCAFP00000032538	ENSCAFP00000007359	Dpy-19 like C-mannosyltransferase 3.	Polypeptide N-acetylgalactosaminyltransferase like 5.	0.795
DPY19L3	OR5AR1	ENSCAFP00000032538	ENSCAFP00000011844	Dpy-19 like C-mannosyltransferase 3.	Olfactory receptor.	0.898
DPY19L3	RAP1GDS1	ENSCAFP00000032538	ENSCAFP00000015079	Dpy-19 like C-mannosyltransferase 3.	Rap1 GTPase-GDP dissociation stimulator 1.	0.790
DPY19L3	TRDV3	ENSCAFP00000032538	ENSCAFP00000036148	Dpy-19 like C-mannosyltransferase 3.	T cell receptor delta variable 3.	0.741
GALNTL5	ASB17	ENSCAFP00000007359	ENSCAFP00000030238	Polypeptide N-acetylgalactosaminyltransferase like 5.	Ankyrin repeat and SOCS box protein 17; May be a substrate-recognition component of a SCF-like ECS (Elongin-Cullin-SOCS-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.	0.746