STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM47Tripartite motif containing 47. (732 aa)    
Predicted Functional Partners:
DDX58
DExD/H-box helicase 58.
   
 0.860
TRIM46
Tripartite motif containing 46.
   
  
 0.648
TRIM44
Tripartite motif containing 44.
    
 
 0.635
G3BP2
G3BP stress granule assembly factor 2.
   
 
 0.621
TRIM42
Tripartite motif containing 42.
    
 
 0.614
TRIM33
Tripartite motif containing 33.
    
 
 0.609
ADAP2
ArfGAP with dual PH domains 2.
      
 0.606
TRIM23
Tripartite motif containing 23.
    
 0.602
TRIM37
Tripartite motif containing 37.
    
 
 0.596
TRIM62
Tripartite motif containing 62.
      
 0.596
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.