STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM65Tripartite motif containing 65. (460 aa)    
Predicted Functional Partners:
DDX58
DExD/H-box helicase 58.
   
 0.860
ZNF311
Zinc finger protein 311.
    
 
 0.817
TRIM46
Tripartite motif containing 46.
   
  
 0.704
TRIM23
Tripartite motif containing 23.
    
 0.633
ARRDC4
Arrestin domain containing 4.
    
 
 0.628
TRIM44
Tripartite motif containing 44.
    
 
 0.628
SPICE1
Spindle and centriole associated protein 1.
    
 
 0.623
CHAF1A
Chromatin assembly factor 1 subunit A.
    
 
 0.622
ZNF783
Zinc finger family member 783.
   
 0.619
VWA5B2
Von Willebrand factor A domain containing 5B2.
    
 
 0.611
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.