STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPUL1Heterogeneous nuclear ribonucleoprotein U like 1. (873 aa)    
Predicted Functional Partners:
HINFP
Histone H4 transcription factor.
   
  
 0.684
SRSF9
Serine and arginine rich splicing factor 9.
   
 
 0.674
TLK2
Tousled like kinase 2.
   
  
 0.659
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.652
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 
 0.601
LSM10
LSM10, U7 small nuclear RNA associated.
   
 
 0.581
RWDD1
RWD domain containing 1.
   
  
 0.580
DNPH1
2'-deoxynucleoside 5'-phosphate N-hydrolase 1; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base. Deoxyribonucleoside 5'-monophosphates containing purine bases are preferred to those containing pyrimidine bases.
      
 0.577
TMEM183A
Transmembrane protein 183A.
      
 0.562
MYEF2
Myelin expression factor 2.
   
 
 0.545
Your Current Organism:
Canis lupus familiaris
NCBI taxonomy Id: 9615
Other names: C. lupus familiaris, Canis canis, Canis domesticus, Canis familiaris, beagle dog, beagle dogs, dog, dogs
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